Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924068.1_cds_XP_016472510.1_64740
CDS Infomation

[gene=LOC107794528] [db_xref=GeneID:107794528] [protein=probable protein phosphatase 2C 42 isoform X2] [protein_id=XP_016472510.1] [location=complement(join(14525..14677,15314..15406,16457..16693,17307..17674,18799..19096))] [gbkey=CDS]
Sequence

ATGAATTTCCTACCAAGATGCTGGAGTTACAGTGAAACAAGTGAAAGTAGGGGAGGCGAA
AGTTCAAGTTCCAATACCAATGGTGGATTTGGGAAAGATGGGTTGTTGTGGTTTCATGAT
ATTGGAAAGTACGGAAGTGGGGAATTCTCAATGGCAATTGTGCAAGCCAATCAGGTTTTA
GAGGATCAAAGTCAGATAGAGTCAGGTCCTTTTGGAACCTTTGTTGGAGTCTATGATGGT
CATGGCGGCCCTGACACTGCTCGTTACGTTTGTGATCATTTATTTCAACATTTCCAAGCA
TCAGCTGAAGGAAATGGTGTTGTAACAGCGGAGACAATTCAAAGGGCTTTTCTTGAGACA
GAGAGAGGGTTTACTTCTCTTGTTTCAGAAAATTGGAATTCTCGACCACAGATGGCGACA
GTGGGGTCATGCTGCCTGGTTGGAGCTATATATCAGCAGACACTTTTTGTAGCAAATCTT
GGTGACTCTCGTGTAGTCCTTGGAAAGAAGGTTGGAAACACTGGGGAAATTGCTGCTATA
CAGCTCTCAACGGAGCATAATGCCAACATTGAGTCTATTAGGTGGGAGCTAAAAGACTTG
CATCCAAATGATCCACAAATCGTTGTTCTTAGACATGGCGTTTGGAGGGTAAAAGGAATA
ATTCAGGTGTCAAGATCCATTGGTGATGTTTACCTTAAACACACCAAGTATTGCAGGGAA
CCAATAAACGGAAAATTCAGAGTTTCTGAACCCATTAACATGCCTGTCCTGTTGGCTACT
CCATCAATTTTAACACATCCTATACACCCAAATGACTCCTTCCTCATATTTGCTTCTGAT
GGTCTATGGGAGCACTTGAGCAATGAGAAGGCCGTTCAAATTGTTCAGAGTCATCCTCGT
AAAGGAAGTGCAAAGAGGCTTGTTAAAGCTGCTCTCCATGAAGCTGCCAAAAAGAGAGAG
ATGCGATATTCGGATCTTCGAAACATCGGCAAAAAGTTCTTTATTGCAGGAATCATATTC
TTCACAGAACACAAGGAATATGGTGCCTTGGTTCCAAGAACTTGGAGAAATATTGGGGTC
GCTTTCCCATCTTGCAAGCCGAGCTGCAGATTGATATTGAATATCACATTTTTATTCAAT
TCATTTTGA

Peptide Sequence

PEP ID

XP_016472510.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 42 isoform X2 [Nicotiana tabacum]
Sequence

MNFLPRCWSYSETSESRGGESSSSNTNGGFGKDGLLWFHDIGKYGSGEFSMAIVQANQVL
EDQSQIESGPFGTFVGVYDGHGGPDTARYVCDHLFQHFQASAEGNGVVTAETIQRAFLET
ERGFTSLVSENWNSRPQMATVGSCCLVGAIYQQTLFVANLGDSRVVLGKKVGNTGEIAAI
QLSTEHNANIESIRWELKDLHPNDPQIVVLRHGVWRVKGIIQVSRSIGDVYLKHTKYCRE
PINGKFRVSEPINMPVLLATPSILTHPIHPNDSFLIFASDGLWEHLSNEKAVQIVQSHPR
KGSAKRLVKAALHEAAKKREMRYSDLRNIGKKFFIAGIIFFTEHKEYGALVPRTWRNIGV
AFPSCKPSCRLILNITFLFNSF

Transcript Sequence

Gene sequence data has not been registered.